BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D01SP1|AL425678
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1564 0.0
>3x_Contig1517
Length = 8289
Score = 1564 bits (789), Expect = 0.0
Identities = 792/793 (99%)
Strand = Plus / Plus
Query: 1 tggtatcaagacgtctgaaatcaaatccaccattgtcaagaaaactgtggttgttgattc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tggtatcaagacgtcagaaatcaaatccaccattgtcaagaaaactgtggttgttgattc 748
Query: 61 gccagatgttttgattcttcacttgtcgcgttcggttttcgacgggatgggatatcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gccagatgttttgattcttcacttgtcgcgttcggttttcgacgggatgggatatcaaaa 808
Query: 121 gaacacctgcaatgtttctttcgaagaagaattggtagtcaaccgccaagttattgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gaacacctgcaatgtttctttcgaagaagaattggtagtcaaccgccaagttattgaaaa 868
Query: 181 caataaatgtgttggcatcagaaaggattcatataagttaaggtcgatgttgaggcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 caataaatgtgttggcatcagaaaggattcatataagttaaggtcgatgttgaggcatca 928
Query: 241 aggttctcattctaccggtcactatgaatgtttcagacacaaaccagagtttatgaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 aggttctcattctaccggtcactatgaatgtttcagacacaaaccagagtttatgaaaga 988
Query: 301 cattgatacacatcaagtcattagcaagacaccaatggtggacttcggtattgcgtcgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 cattgatacacatcaagtcattagcaagacaccaatggtggacttcggtattgcgtcgaa 1048
Query: 361 taaacttgcagctgaaatctggaatcaggccgttctgaactcctctaacaaatccgattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 taaacttgcagctgaaatctggaatcaggccgttctgaactcctctaacaaatccgattc 1108
Query: 421 ttgttcaatcggctcggaagattcaatctcctctaacgtgccattcagatctgttttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 ttgttcaatcggctcggaagattcaatctcctctaacgtgccattcagatctgttttcct 1168
Query: 481 ggactcaccaaactctgcgattgttactgatgatgattacgttattggaagctcagagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 ggactcaccaaactctgcgattgttactgatgatgattacgttattggaagctcagagtt 1228
Query: 541 ctctaacgacgcagataataagggccaaaacaacaacagtggttctggagtttcaaggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 ctctaacgacgcagataataagggccaaaacaacaacagtggttctggagtttcaaggac 1288
Query: 601 gccatccactttgaaaagagtcactggtttcctttcgagaaagagttctgtctcggcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 gccatccactttgaaaagagtcactggtttcctttcgagaaagagttctgtctcggcagc 1348
Query: 661 accggataataacaatactagcaatatactacctgaaattagcagttcacccatggcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 accggataataacaatactagcaatatactacctgaaattagcagttcacccatggcttc 1408
Query: 721 atcatcttcagaacatagaaaccgcgcaagatttaacagtgtctcttctatgacgactga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 atcatcttcagaacatagaaaccgcgcaagatttaacagtgtctcttctatgacgactga 1468
Query: 781 ccgcaacgcttcg 793
|||||||||||||
Sbjct: 1469 ccgcaacgcttcg 1481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6314
Number of Sequences: 1807
Number of extensions: 6314
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)